Transcript: lnc-RDX-1:7

Basic information

LNCipedia transcript ID: lnc-RDX-1:7 
LNCipedia gene ID: lnc-RDX-1
Location (hg19): chr11:109936116-109958899
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 391 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254659.2|MICT00000067050.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -170.1387 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RDX-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RDX-1:7
5.0 lnc-RDX-1:7
5.1 lnc-ARHGAP20-30:5
5.2 lnc-RDX-1:7