Transcript: lnc-RFC3-5:1

Basic information

LNCipedia transcript ID: lnc-RFC3-5:1 
LNCipedia gene ID: lnc-RFC3-5
Location (hg19): chr13:34653548-34654271
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 724 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT033164
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -416.8953 non-coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFC3-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RFC3-5:1
4.0 lnc-RFC3-5:1
4.1 lnc-RFC3-5:1
5.0 lnc-RFC3-5:1
5.1 lnc-KL-12:1
5.2 lnc-RFC3-5:1