Transcript: lnc-RFC3-7:4

Basic information

LNCipedia transcript ID: lnc-RFC3-7:4 
LNCipedia gene ID: lnc-RFC3-7
Location (hg19): chr13:34116703-34123085
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5239 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014288.1|ENCT00000111468.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -60.9769 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFC3-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RFC3-7:4
5.0 lnc-RFC3-7:4
5.1 lnc-KL-7:3
5.2 lnc-RFC3-7:4