Transcript: lnc-RFESD-1:1

Basic information

LNCipedia transcript ID: lnc-RFESD-1:1 
LNCipedia gene ID: lnc-RFESD-1
Location (hg19): chr5:94993766-95020477
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 725 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000508206.1; CTD-2154I11.1-001; OTTHUMT00000370266.1; NONHSAT102855
Alternative gene names: ENSG00000251659.1; CTD-2154I11.1; OTTHUMG00000162738.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.6472 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFESD-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RFESD-1:1
4.0 lnc-RFESD-1:1
4.1 lnc-RFESD-1:1
5.0 lnc-RFESD-1:1
5.1 lnc-GPR150-2:1
5.2 lnc-RFESD-1:1