Transcript: lnc-RFX2-2:7

Basic information

LNCipedia transcript ID: lnc-RFX2-2:7 
LNCipedia gene ID: lnc-RFX2-2
Location (hg19): chr19:5925675-5928455
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 551 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT060726
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.5328 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFX2-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDUFA11-1:7
4.0 lnc-RFX2-1:7
4.1 lnc-RFX2-1:7
5.0 lnc-RFX2-1:7
5.1 lnc-TIMM44-58:7
5.2 lnc-RFX2-2:7