Transcript: lnc-RGS5-1:16

Basic information

LNCipedia transcript ID: lnc-RGS5-1:16 
LNCipedia gene ID: lnc-RGS5-1
Location (hg19): chr1:163080911-163122506
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 364 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT007245
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 291.3688 coding 
CPAT coding probability 3.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RGS5-1:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RGS5-1:16
4.0 lnc-RGS5-1:16
4.1 lnc-RGS5-1:16
5.0 lnc-RGS5-1:16
5.1 lnc-SH2D1B-22:28
5.2 lnc-RGS5-1:16