Transcript: lnc-RGS5-1:25

Basic information

LNCipedia transcript ID: lnc-RGS5-1:25 
LNCipedia gene ID: lnc-RGS5-1
Location (hg19): chr1:163270348-163291525
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 543 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232995.3|ENST00000528019.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -49.1374 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGS5-1:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RGS5-1:25
5.0 lnc-RGS5-1:25
5.1 lnc-SH2D1B-22:20
5.2 lnc-RGS5-1:25