Transcript: lnc-RGS8-6:1

Basic information

LNCipedia transcript ID: lnc-RGS8-6:1 
LNCipedia gene ID: lnc-RGS8-6
Location (hg19): chr1:182610951-182612442
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1492 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000570153.1; RP11-317P15.5-001; OTTHUMT00000431579.1
Alternative gene names: ENSG00000261185.1; RP11-317P15.5; OTTHUMG00000176159.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.5144 non-coding 
CPAT coding probability 8.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGS8-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RGS8-1:1
4.0 lnc-RGS8-6:1
4.1 lnc-RGS8-6:1
5.0 lnc-RGS8-6:1
5.1 lnc-SH2D1B-208:1
5.2 lnc-RGS8-6:1