Transcript: lnc-RGS9-15:8

Basic information

LNCipedia transcript ID: lnc-RGS9-15:8 
LNCipedia gene ID: lnc-RGS9-15
Ensembl Gene ID: ENSG00000280299
Ensembl Transcript ID: ENST00000577423
Location (hg19): chr17:62936720-62950295
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 625 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577423.2
Alternative gene names: ENSG00000280299.1; RP11-583F2.7; AC037487.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1221.2126 coding 
CPAT coding probability 69.75% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RGS9-15:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC037487.1-6:9
4.1 lnc-AC037487.1-6:9
5.0 lnc-AC037487.1-6:9
5.1 lnc-TANC2-63:8
5.2 lnc-RGS9-15:8