Transcript: lnc-RGSL1-7:1

Basic information

LNCipedia transcript ID: lnc-RGSL1-7:1 
LNCipedia gene ID: lnc-RGSL1-7
Location (hg19): chr1:182128790-182130473
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1142 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT008307; FPKM1_group_1794_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.2193 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGSL1-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RGSL1-7:1
4.0 lnc-RGSL1-7:1
4.1 lnc-RGSL1-7:1
5.0 lnc-RGSL1-7:1
5.1 lnc-XPR1-20:1
5.2 lnc-RGSL1-7:1