Transcript: lnc-RHOB-3:2

Basic information

LNCipedia transcript ID: lnc-RHOB-3:2 
LNCipedia gene ID: lnc-RHOB-3
RefSeq ID: NR_110235
Location (hg19): chr2:20189965-20204567
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1150 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110235; NR_110235.1
Alternative gene names: LOC101928222


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -232.3161 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RHOB-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RHOB-3:2
4.0 lnc-RHOB-3:2
4.1 lnc-RHOB-3:2
5.0 lnc-RHOB-3:2
5.1 lnc-SNX17-98:1
5.2 lnc-RHOB-3:2