Transcript: lnc-RIN3-2:1

Basic information

LNCipedia transcript ID: lnc-RIN3-2:1 
LNCipedia gene ID: lnc-RIN3-2
Location (hg19): chr14:92830457-92832286
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1830 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_chen_BX099352_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.9813 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIN3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RIN3-2:1
4.0 lnc-RIN3-2:1
4.1 lnc-RIN3-2:1
5.0 lnc-RIN3-2:1
5.1 lnc-GLRX5-66:1
5.2 lnc-RIN3-2:1