Transcript: lnc-RIPK1-8:11

Basic information

LNCipedia transcript ID: lnc-RIPK1-8:11 
LNCipedia gene ID: lnc-RIPK1-8
Location (hg19): chr6:3020388-3022984
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2597 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT106931; ENST00000603222.1
Alternative gene names: ENSG00000270346.1; RP1-90J20.12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.1656 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIPK1-8:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RIPK1-8:4
4.0 lnc-NQO2-8:5
4.1 lnc-NQO2-8:5
5.0 lnc-NQO2-8:5
5.1 lnc-RIPK1-8:8
5.2 lnc-RIPK1-8:11