Transcript: lnc-RIPOR2-1:2

Basic information

LNCipedia transcript ID: lnc-RIPOR2-1:2 
LNCipedia gene ID: lnc-RIPOR2-1
Location (hg19): chr6:25015180-25042398
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1030 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000606385.1
Alternative gene names: ENSG00000272053.1; RP11-367G6.3; AL160400.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 684.4276 coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RIPOR2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM65B-1:2
4.0 lnc-FAM65B-1:2
4.1 lnc-FAM65B-1:2
5.0 lnc-FAM65B-1:2
5.1 lnc-C6orf62-13:2
5.2 lnc-RIPOR2-1:2