Transcript: lnc-RIPOR3-8:1

Basic information

LNCipedia transcript ID: lnc-RIPOR3-8:1 
LNCipedia gene ID: lnc-RIPOR3-8
Location (hg19): chr20:49083861-49087013
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 612 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000055114.1|ENCT00000267884.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -61.3939 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIPOR3-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM65C-8:1
5.0 lnc-FAM65C-8:1
5.1 lnc-SPATA2-19:1
5.2 lnc-RIPOR3-8:1