Transcript: lnc-RIT2-2:8

Basic information

LNCipedia transcript ID: lnc-RIT2-2:8 
LNCipedia gene ID: lnc-RIT2-2
Location (hg19): chr18:39060236-39100561
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1712 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT059045; NR_002838
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.1919 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIT2-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RIT2-2:8
4.0 lnc-RIT2-2:8
4.1 lnc-RIT2-2:8
5.0 lnc-RIT2-2:8
5.1 lnc-SMAD2-53:9
5.2 lnc-RIT2-2:8