Transcript: lnc-RMDN2-3:13

Basic information

LNCipedia transcript ID: lnc-RMDN2-3:13 
LNCipedia gene ID: lnc-RMDN2-3
Location (hg19): chr2:37827065-37839573
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 699 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003640; NONHSAT070129
Alternative gene names: XLOC_001430; linc-FAM82A1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.1394 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RMDN2-3:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-QPCT-3:3
3.1 lnc-QPCT-3:3
4.0 lnc-QPCT-3:3
4.1 lnc-FAM82A1-3:15
5.0 lnc-FAM82A1-3:15
5.1 lnc-RASGRP3-35:14
5.2 lnc-RMDN2-3:13