Transcript: lnc-RMDN2-3:16

Basic information

LNCipedia transcript ID: lnc-RMDN2-3:16 
LNCipedia gene ID: lnc-RMDN2-3
Location (hg19): chr2:37827309-37873841
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 518 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236213.1|ENST00000419425.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.1394 non-coding 
CPAT coding probability 3.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RMDN2-3:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM82A1-3:19
5.0 lnc-FAM82A1-3:19
5.1 lnc-RASGRP3-35:17
5.2 lnc-RMDN2-3:16