Transcript: lnc-RNASEH1-12:6

Basic information

LNCipedia transcript ID: lnc-RNASEH1-12:6 
LNCipedia gene ID: lnc-RNASEH1-12
Location (hg19): chr2:3618479-3621891
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 517 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004100; NONHSAT068744
Alternative gene names: XLOC_001953; linc-RNASEH1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.9199 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNASEH1-12:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNASEH1-1:2
3.1 lnc-RNASEH1-1:2
4.0 lnc-RNASEH1-1:2
4.1 lnc-RNASEH1-1:2
5.0 lnc-RNASEH1-1:2
5.1 lnc-RAD51AP2-178:6
5.2 lnc-RNASEH1-12:6