Transcript: lnc-RNF144A-2:11

Basic information

LNCipedia transcript ID: lnc-RNF144A-2:11 
LNCipedia gene ID: lnc-RNF144A-2
RefSeq ID: NR_038432
Location (hg19): chr2:7561392-7590385
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 927 bp
Exons: 6
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038432.1
Alternative gene names: LOC100506274


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -276.6751 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF144A-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SNX17-238:3
5.1 lnc-SNX17-238:3
5.2 lnc-RNF144A-2:11