Transcript: lnc-RNF145-6:1

Basic information

LNCipedia transcript ID: lnc-RNF145-6:1 
LNCipedia gene ID: lnc-RNF145-6
Location (hg19): chr5:158688736-158690211
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1476 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081807.1|FTMT21800010929.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.3651 non-coding 
CPAT coding probability 10.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF145-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RNF145-6:1
5.0 lnc-RNF145-6:1
5.1 lnc-FAM71B-29:2
5.2 lnc-RNF145-6:1