Transcript: lnc-RNF168-1:1

Basic information

LNCipedia transcript ID: lnc-RNF168-1:1 
LNCipedia gene ID: lnc-RNF168-1
Location (hg19): chr3:196127000-196159298
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 921 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT094333
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 707.5587 coding 
CPAT coding probability 22.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RNF168-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF168-1:1
4.0 lnc-RNF168-1:1
4.1 lnc-RNF168-1:1
5.0 lnc-RNF168-1:1
5.1 lnc-TCTEX1D2-9:1
5.2 lnc-RNF168-1:1