Transcript: lnc-RNF213-2:5

Basic information

LNCipedia transcript ID: lnc-RNF213-2:5 
LNCipedia gene ID: lnc-RNF213-2
Location (hg19): chr17:78391217-78392406
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 694 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT056399
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.7636 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF213-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF213-1:5
4.0 lnc-RNF213-2:5
4.1 lnc-RNF213-2:5
5.0 lnc-RNF213-2:5
5.1 lnc-TSPAN10-83:5
5.2 lnc-RNF213-2:5