Transcript: lnc-RNF24-2:11

Basic information

LNCipedia transcript ID: lnc-RNF24-2:11 
LNCipedia gene ID: lnc-RNF24-2
Location (hg19): chr20:3856128-3857119
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 992 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr20_565_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.414 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF24-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF24-5:1
4.0 lnc-RNF24-5:1
4.1 lnc-RNF24-2:11
5.0 lnc-RNF24-2:11
5.1 lnc-RNF24-2:11
5.2 lnc-RNF24-2:11