Transcript: lnc-RNF25-3:1

Basic information

LNCipedia transcript ID: lnc-RNF25-3:1 
LNCipedia gene ID: lnc-RNF25-3
Location (hg19): chr2:219608321-219610057
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1737 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000051556.1|FTMT20600013641.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 72.7725 coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RNF25-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RNF25-3:1
5.0 lnc-RNF25-3:1
5.1 lnc-MREG-41:1
5.2 lnc-RNF25-3:1