Transcript: lnc-RNF32-1:1

Basic information

LNCipedia transcript ID: lnc-RNF32-1:1 
LNCipedia gene ID: lnc-RNF32-1
Location (hg19): chr7:156426049-156426481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 433 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT124426
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 2 coding 
Peptide Confidence Reading frame
YKEETIEKMQE 97.2972972972973% sense-2
DDEVQVVR 100% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.8223 non-coding 
CPAT coding probability 6.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RNF32-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF32-1:1
4.0 lnc-RNF32-1:1
4.1 lnc-RNF32-1:1
5.0 lnc-RNF32-1:1
5.1 lnc-RNF32-1:1
5.2 lnc-RNF32-1:1