Transcript: lnc-RNF7-2:4

Basic information

LNCipedia transcript ID: lnc-RNF7-2:4 
LNCipedia gene ID: lnc-RNF7-2
RefSeq ID: NR_136190
Location (hg19): chr3:141382041-141439916
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 977 bp
Exons: 8
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136190.1
Alternative gene names: LOC646730


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1053.8515 coding 
CPAT coding probability 95.71% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RNF7-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PXYLP1-9:3
5.1 lnc-PXYLP1-9:3
5.2 lnc-RNF7-2:4