Transcript: lnc-ROCK2-3:1

Basic information

LNCipedia transcript ID: lnc-ROCK2-3:1 
LNCipedia gene ID: lnc-ROCK2-3
Ensembl Gene ID: ENSG00000145063
Ensembl Transcript ID: ENST00000447433
Location (hg19): chr2:11264345-11272896
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1472 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000447433; ENST00000447433.1; AC062028.1-003; OTTHUMT00000323581.1; NONHSAT069143; ENST00000447433.5
Alternative gene names: ENSG00000145063; AC062028.1; ENSG00000145063.9; OTTHUMG00000119056.3; ENSG00000145063.10; ENSG00000145063.14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.9227 non-coding 
CPAT coding probability 75.08% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ROCK2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ROCK2-3:1
3.1 lnc-ROCK2-3:1
4.0 lnc-ROCK2-3:1
4.1 lnc-ROCK2-3:1
5.0 lnc-ROCK2-3:1
5.1 lnc-RAD51AP2-91:2
5.2 lnc-ROCK2-3:1