Transcript: lnc-ROCK2-3:10

Basic information

LNCipedia transcript ID: lnc-ROCK2-3:10 
LNCipedia gene ID: lnc-ROCK2-3
Ensembl Gene ID: ENSG00000145063
Ensembl Transcript ID: ENST00000590207
Location (hg19): chr2:11268665-11272234
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 574 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT069148; ENST00000590207.1
Alternative gene names: ENSG00000145063.10; AC062028.1; ENSG00000145063.14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.9227 non-coding 
CPAT coding probability 13.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ROCK2-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ROCK2-3:10
4.0 lnc-ROCK2-3:10
4.1 lnc-ROCK2-3:10
5.0 lnc-ROCK2-3:10
5.1 lnc-RAD51AP2-91:13
5.2 lnc-ROCK2-3:10