Transcript: lnc-ROCK2-3:20

Basic information

LNCipedia transcript ID: lnc-ROCK2-3:20 
LNCipedia gene ID: lnc-ROCK2-3
Location (hg19): chr2:11262329-11270100
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3740 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000145063.10|HBMT00000798791.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.1655 non-coding 
CPAT coding probability 57.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ROCK2-3:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ROCK2-3:20
5.0 lnc-ROCK2-3:20
5.1 lnc-RAD51AP2-91:16
5.2 lnc-ROCK2-3:20