Transcript: lnc-ROCK2-3:3

Basic information

LNCipedia transcript ID: lnc-ROCK2-3:3 
LNCipedia gene ID: lnc-ROCK2-3
Location (hg19): chr2:11239977-11272302
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1405 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000417697; ENST00000417697.2; AC062028.1-201; NONHSAT069136
Alternative gene names: ENSG00000145063; AC062028.1; ENSG00000145063.9; OTTHUMG00000119056.3; ENSG00000145063.10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.6508 non-coding 
CPAT coding probability 70.73% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ROCK2-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ROCK2-3:5
3.1 lnc-ROCK2-3:3
4.0 lnc-ROCK2-3:3
4.1 lnc-ROCK2-3:3
5.0 lnc-ROCK2-3:3
5.1 lnc-RAD51AP2-91:8
5.2 lnc-ROCK2-3:3