Transcript: lnc-RPAIN-2:2

Basic information

LNCipedia transcript ID: lnc-RPAIN-2:2 
LNCipedia gene ID: lnc-RPAIN-2
Location (hg19): chr17:5389897-5390479
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 267 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT145231
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -179.3028 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPAIN-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MIS12-2:1
4.0 lnc-MIS12-2:1
4.1 lnc-MIS12-2:1
5.0 lnc-MIS12-2:1
5.1 lnc-ELP5-37:1
5.2 lnc-RPAIN-2:2