Transcript: lnc-RPE-9:5

Basic information

LNCipedia transcript ID: lnc-RPE-9:5 
LNCipedia gene ID: lnc-RPE-9
Location (hg19): chr2:211036277-211104311
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9582 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231294.1|MICT00000206785.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.8834 non-coding 
CPAT coding probability 3.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPE-9:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPE-9:5
5.0 lnc-RPE-9:5
5.1 lnc-CPS1-9:4
5.2 lnc-RPE-9:5