Transcript: lnc-RPIA-25:1

Basic information

LNCipedia transcript ID: lnc-RPIA-25:1 
LNCipedia gene ID: lnc-RPIA-25
Ensembl Gene ID: ENSG00000281904
Ensembl Transcript ID: ENST00000631132
Location (hg19): chr2:90406336-90408298
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1963 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000631132.1
Alternative gene names: ENSG00000281904.1; CH17-132F21.5; AC233263.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.8956 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPIA-25:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC233263.1-13:1
4.1 lnc-AC233263.1-13:1
5.0 lnc-AC233263.1-13:1
5.1 lnc-SLC9A4-164:1
5.2 lnc-RPIA-25:1