Transcript: lnc-RPL13-1:6

Basic information

LNCipedia transcript ID: lnc-RPL13-1:6 
LNCipedia gene ID: lnc-RPL13-1
Location (hg19): chr16:89557261-89567120
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2386 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT144529
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 89.8315 coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPL13-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL13-1:3
4.0 lnc-SPG7-1:4
4.1 lnc-SPG7-1:4
5.0 lnc-SPG7-1:4
5.1 lnc-MAP1LC3B-34:1
5.2 lnc-RPL13-1:6