Transcript: lnc-RPL22L1-4:1

Basic information

LNCipedia transcript ID: lnc-RPL22L1-4:1 
LNCipedia gene ID: lnc-RPL22L1-4
Location (hg19): chr3:170468862-170469256
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 395 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066816.1|ENCT00000311399.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -657.3106 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL22L1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPL22L1-4:1
5.0 lnc-RPL22L1-4:1
5.1 lnc-TBL1XR1-47:1
5.2 lnc-RPL22L1-4:1