Transcript: lnc-RPL34-1:1

Basic information

LNCipedia transcript ID: lnc-RPL34-1:1 
LNCipedia gene ID: lnc-RPL34-1
RefSeq ID: NR_134679
Location (hg19): chr4:109478389-109481548
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 586 bp
Exons: 2
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT097759; NR_134679.1
Alternative gene names: LOC101929621


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.3926 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL34-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL34-1:1
4.0 lnc-RPL34-1:1
4.1 lnc-RPL34-1:1
5.0 lnc-RPL34-1:1
5.1 lnc-GAR1-14:1
5.2 lnc-RPL34-1:1