Transcript: lnc-RPL36-2:2

Basic information

LNCipedia transcript ID: lnc-RPL36-2:2 
LNCipedia gene ID: lnc-RPL36-2
Location (hg19): chr19:5642541-5642888
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 348 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expRegAs_chr19_1325_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.2189 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL36-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSD11B1L-2:1
4.0 lnc-HSD11B1L-2:1
4.1 lnc-HSD11B1L-2:1
5.0 lnc-HSD11B1L-2:1
5.1 lnc-RPL36-2:1
5.2 lnc-RPL36-2:2