Transcript: lnc-RPRM-3:3

Basic information

LNCipedia transcript ID: lnc-RPRM-3:3 
LNCipedia gene ID: lnc-RPRM-3
Location (hg19): chr2:155269387-155313950
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 15050 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224675.1|MICT00000201214.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 164.5885 coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPRM-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPRM-3:3
5.0 lnc-RPRM-3:3
5.1 lnc-MMADHC-61:2
5.2 lnc-RPRM-3:3