Transcript: lnc-RPRML-3:25

Basic information

LNCipedia transcript ID: lnc-RPRML-3:25 
LNCipedia gene ID: lnc-RPRML-3
Location (hg19): chr17:45060723-45076166
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 814 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054237
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.9725 non-coding 
CPAT coding probability 11.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPRML-3:25 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPRML-3:25
4.0 lnc-RPRML-3:25
4.1 lnc-RPRML-3:25
5.0 lnc-RPRML-3:25
5.1 lnc-GFAP-56:28
5.2 lnc-RPRML-3:25