Transcript: lnc-RPS17-1:4

Basic information

LNCipedia transcript ID: lnc-RPS17-1:4 
LNCipedia gene ID: lnc-RPS17-1
Location (hg19): chr15:82821196-82824541
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1922 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT047795
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 260.9574 coding 
CPAT coding probability 5.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS17-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP13-996F3.5.1-3:2
4.0 lnc-RP13-996F3.5.1-3:2
4.1 lnc-RP13-996F3.5.1-3:2
5.0 lnc-RP13-996F3.5.1-3:2
5.1 lnc-FSD2-10:3
5.2 lnc-RPS17-1:4