Transcript: lnc-RPS17-1:6

Basic information

LNCipedia transcript ID: lnc-RPS17-1:6 
LNCipedia gene ID: lnc-RPS17-1
Ensembl Gene ID: ENSG00000284803
Ensembl Transcript ID: ENST00000561440
Location (hg19): chr15:83201926-83208759
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 312 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561440.2
Alternative gene names: ENSG00000284803.1; AC245033.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -212.2451 non-coding 
CPAT coding probability 84.81% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS17-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FSD2-10:5
5.1 lnc-FSD2-10:5
5.2 lnc-RPS17-1:6