Transcript: lnc-RPS24-2:2

Basic information

LNCipedia transcript ID: lnc-RPS24-2:2 
LNCipedia gene ID: lnc-RPS24-2
Location (hg19): chr10:79542624-79551665
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 759 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000434097.1; RP13-39P12.3-001; OTTHUMT00000048897.1
Alternative gene names: ENSG00000228748.1; RP13-39P12.3; OTTHUMG00000018545.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.2297 non-coding 
CPAT coding probability 7.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS24-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL391421.1-2:1
4.0 lnc-AL391421.1-2:1
4.1 lnc-AL391421.1-2:1
5.0 lnc-AL391421.1-2:1
5.1 lnc-MTRNR2L5-219:1
5.2 lnc-RPS24-2:2