Transcript: lnc-RPS27L-10:1

Basic information

LNCipedia transcript ID: lnc-RPS27L-10:1 
LNCipedia gene ID: lnc-RPS27L-10
Location (hg19): chr15:63027558-63029250
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1693 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ncRnaDb_ncrna_FR343691_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 462.1161 coding 
CPAT coding probability 4.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RPS27L-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-625H11.1.1-4:1
4.0 lnc-RP11-625H11.1.1-4:1
4.1 lnc-RP11-625H11.1.1-4:1
5.0 lnc-RP11-625H11.1.1-4:1
5.1 lnc-ICE2-60:1
5.2 lnc-RPS27L-10:1