Transcript: lnc-RPS27L-9:2

Basic information

LNCipedia transcript ID: lnc-RPS27L-9:2 
LNCipedia gene ID: lnc-RPS27L-9
Location (hg19): chr15:63121388-63176244
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6409 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259370.1|ENCT00000149858.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.4195 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS27L-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-625H11.1.1-3:6
5.0 lnc-RP11-625H11.1.1-3:6
5.1 lnc-ICE2-61:2
5.2 lnc-RPS27L-9:2