Transcript: lnc-RPS29-3:1

Basic information

LNCipedia transcript ID: lnc-RPS29-3:1 
LNCipedia gene ID: lnc-RPS29-3
Location (hg19): chr14:49574063-49577697
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2301 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001wxl_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.1721 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS29-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS29-3:1
4.0 lnc-RPS29-3:1
4.1 lnc-RPS29-3:1
5.0 lnc-RPS29-3:1
5.1 lnc-RTN1-135:1
5.2 lnc-RPS29-3:1