Transcript: lnc-RPS6KL1-1:2

Basic information

LNCipedia transcript ID: lnc-RPS6KL1-1:2 
LNCipedia gene ID: lnc-RPS6KL1-1
Location (hg19): chr14:75411267-75414918
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3549 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT037831
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.1292 non-coding 
CPAT coding probability 3.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPS6KL1-1:2 no no no no

Available literature

  1. Lan (2016), Downregulation of long noncoding RNA NONHSAT037832 in papillary thyroid carcinoma and its clinical significance., Tumour Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPS6KL1-1:2
4.0 lnc-RPS6KL1-1:2
4.1 lnc-RPS6KL1-1:2
5.0 lnc-RPS6KL1-1:2
5.1 lnc-PROX2-2:2
5.2 lnc-RPS6KL1-1:2