Transcript: lnc-RPUSD3-2:1

Basic information

LNCipedia transcript ID: lnc-RPUSD3-2:1 
LNCipedia gene ID: lnc-RPUSD3-2
Location (hg19): chr3:9883420-9886286
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 630 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT087830
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3422 non-coding 
CPAT coding probability 12.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPUSD3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CIDEC-2:1
4.0 lnc-RPUSD3-2:1
4.1 lnc-RPUSD3-2:1
5.0 lnc-RPUSD3-2:1
5.1 lnc-PRRT3-5:1
5.2 lnc-RPUSD3-2:1