Transcript: lnc-RREB1-9:4

Basic information

LNCipedia transcript ID: lnc-RREB1-9:4 
LNCipedia gene ID: lnc-RREB1-9
Location (hg19): chr6:6885906-6900307
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3509 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000082570.1|MICT00000296712.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.6923 non-coding 
CPAT coding probability 18.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RREB1-9:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RREB1-4:6
5.0 lnc-RREB1-4:6
5.1 lnc-PRPF4B-84:4
5.2 lnc-RREB1-9:4