Transcript: lnc-RRM2-3:3

Basic information

LNCipedia transcript ID: lnc-RRM2-3:3 
LNCipedia gene ID: lnc-RRM2-3
Ensembl Gene ID: ENSG00000163009
Ensembl Transcript ID: ENST00000642996
Location (hg19): chr2:10282452-10286259
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 656 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642996.1
Alternative gene names: ENSG00000163009.9; C2orf48


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.0535 non-coding 
CPAT coding probability 16.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RRM2-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SNX17-198:3
5.1 lnc-SNX17-198:3
5.2 lnc-RRM2-3:3